Sunday, August 26, 2007

Taxonomy

Taxonomy is the practice and science of classification. The word comes from the Greek τάξις, taxis, 'order' + νόμος, nomos, 'law' or 'science'. Taxonomies, or taxonomic schemes, are composed of taxonomic units known as taxa (singular taxon), or kinds of things that are arranged frequently in a hierarchical structure, typically related by subtype-supertype relationships, also called parent-child relationships. In such a subtype-supertype relationship the subtype kind of thing has by definition the same constraints as the supertype kind of thing plus one or more additional constraints. For example, car is a subtype of vehicle. So any car is also a vehicle, but not every vehicle is a car. So, a thing needs to satisfy more constraints to be a car than to be a vehicle.
Originally the term taxonomy referred to the science of classifying living organisms (now known as alpha taxonomy); however, the term is now applied in a wider, more general sense and now may refer to a classification of things, as well as to the principles underlying such a classification.

Almost anything, animate objects, inanimate objects, places, concepts, events, properties, and relationships may be classified according to some taxonomic scheme.

The term taxonomy may also apply to relationship schemes other than parent-child hierarchies, such as network structures with other types of relationships. Taxonomies may include single children with multi-parents, for example, "Car" might appear with both parents "Vehicle" and "Steel Mechanisms"; to some however, this merely means that 'car' is a part of several different taxonomies.

A taxonomy might also be a simple organization of kinds of things into groups, or even an alphabetical list. However, the term vocabulary is more appropriate for such a list. In current usage within "Knowledge Management", taxonomies are seen as less broad than ontologies as ontologies apply a larger variety of relation types.

Mathematically, a hierarchical taxonomy is a tree structure of classifications for a given set of objects. It is also named Containment hierarchy. At the top of this structure is a single classification, the root node, that applies to all objects. Nodes below this root are more specific classifications that apply to subsets of the total set of classified objects. So for instance, in common schemes of scientific classification of organisms, the root is called "Organism" followed by nodes for the ranks: Domain, Kingdom, Phylum, Class, etc. (more details below but no one ever noticed that first cases of taxonomy were discovered in the early 1400's).


[edit] Taxonomy and mental classification
Some have argued that the human mind naturally organizes its knowledge of the world into such systems. This view is often based on the epistemology of Immanuel Kant. Anthropologists have observed that taxonomies are generally embedded in local cultural and social systems, and serve various social functions. Perhaps the most well-known and influential study of folk taxonomies is Émile Durkheim's The Elementary Forms of Religious Life.


[edit] Various taxonomies
In alpha taxonomy, which is traditionally more focused on the species and infraspecific level, organisms are grouped according to various morphological and genetic characteristics into taxa of various ranks, including Species (and various infraspecific groupings, including Subspecies and possibly additional subdivisions), which are grouped into genera (singular: genus), and various higher classifications (including families, orders, classes, phyla (singular: phylum) or divisions, kingdoms, etc.). Due to sometimes complex interrelationships within various groups (such as insects), additional levels of classification are utilized, such as subphylum, "infraclass" superorder, subfamily, subtribe, etc.) (more at: scientific classification or Linnaean taxonomy).

In phylogenetic taxonomy (or cladistic taxonomy), organisms can be classified by clades, which are based on evolutionary grouping by ancestral traits. By using clades as the criteria for separation, cladistic taxonomy, using cladograms, can categorize taxa into unranked groups.

In numerical taxonomy or taximetrics, the field of solving or best-fitting of numerical equations that characterize all measurable quantities of a set of objects is called cluster analysis.


[edit] Non-scientific taxonomy
Other taxonomies, such as those analyzed by Durkheim and Lévi-Strauss, are sometimes called folk taxonomies to distinguish them from scientific taxonomies that claim to be disembedded from social relations and thus objective and universal.

Baraminology, a creationist alternative to cladistics, is a system that emphasizes reproductive isolation to delineate clear baramins (sometimes, "holobaramins)" of living things. The baramins are then grouped into levels of polybaramins based on similarity and degree of common design. These polybaramins can be identified as families, orders, divisions, and so on. Baraminologists often regard mammals as a separate class from other vertebrates.

The neologism folksonomy should not be confused with "folk taxonomy" (though it is obviously a contraction of the two words). Those who support scientific taxonomies have recently criticized folksonomies by dubbing them "fauxonomies" (French word "faux" means "false").

The phrase "enterprise taxonomy" is used in business to describe a very limited form of taxonomy used only within one organization. An example would be a certain method of classifying trees as "Type A", "Type B" and "Type C" used only by a certain lumber company for categorising log shipments.

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